BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005B08LP1|AL425333
(966 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1758 0.0
3x_Contig1530 846 0.0
3x_Contig18 434 e-121
>3x_Contig1461
Length = 5478
Score = 1758 bits (883), Expect = 0.0
Identities = 944/967 (97%), Gaps = 1/967 (0%)
Strand = Plus / Minus
Query: 1 gatcctgccagtagtcatatgcttgtctcaaagattaagccatgcatgtctaagtataag 60
|||| ||| |||||| |||||||||| | ||||||||||| |||||||| ||||||||||
Sbjct: 2027 gatcttgcgagtagttatatgcttgtataaaagattaagcaatgcatgtataagtataag 1968
Query: 61 caatttatacagtgaactgcgaatkgctcattatatttkttatcgtttatttgatagttc 120
|||||||||||||||| ||||||| | |||||| || |||||||||||||||||||||
Sbjct: 1967 caatttatacagtgaaatgcgaatgggtcattaaatcagttatcgtttatttgatagttc 1908
Query: 121 ctttactacatggatatctgtggtaattctagagctaatacatgcttaaaatctcgaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1907 ctttactacatggatatctgtggtaattctagagctaatacatgcttaaaatctcgaccc 1848
Query: 181 tttggawgtkatgtatttattagataaaamatcaatgtcttcggactccttgatgattca 240
|||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1847 tttggaagagatgtatttattagataaaaaatcaatgtcttcggactccttgatgattca 1788
Query: 241 taataacttttcgaatcgcatggccttgtgctggcgatggttcattcaaatttctgccct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1787 taataacttttcgaatcgcatggccttgtgctggcgatggttcattcaaatttctgccct 1728
Query: 301 atcaactttcgatggtaggatagtggcctaccatggtttcaacgggtaacggggaataag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1727 atcaactttcgatggtaggatagtggcctaccatggtttcaacgggtaacggggaataag 1668
Query: 361 ggttcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagcaggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1667 ggttcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagcaggc 1608
Query: 421 gcgcaaattacccaatcctaattcagggaggtagtgacaataaataacgatacagggccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1607 gcgcaaattacccaatcctaattcagggaggtagtgacaataaataacgatacagggccc 1548
Query: 481 attcgggtcttgtaattggaatgagtacaatgtaaataccttaacgaggaacaactggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1547 attcgggtcttgtaattggaatgagtacaatgtaaataccttaacgaggaacaactggag 1488
Query: 541 ggcaagtctggtgccagcagccgcggtaattccagctccagtagcgtatattaaagttgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1487 ggcaagtctggtgccagcagccgcggtaattccagctccagtagcgtatattaaagttgt 1428
Query: 601 tgcagttaaaaagctcgtagttgaactttgggtctggttgtccggtccgactttatgtcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1427 tgcagttaaaaagctcgtagttgaactttgggtctggttgtccggtccgactttatgtcg 1368
Query: 661 cgcactggttttcaaccggatctttccttctggctaacctgtactccttgtgggtgcagg 720
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1367 cgcactggttatcaaccggatctttccttctggctaacctgtactccttgtgggtgcagg 1308
Query: 721 cgaaccaggacttttactttgaaaaaattagagtgttcaaagcaggcgaaa-ctcgaata 779
||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1307 cgaaccattacttttactttgaaaaaattagagtgttcaaagcaggcgaaagctcgaata 1248
Query: 780 tattagcatggaataatggaataggacgtttggttctattttgttggtttctaggaccat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1247 tattagcatggaataatggaataggacgtttggttctattttgttggtttctaggaccat 1188
Query: 840 cgtaatgattaatagggacggtcgggggcatcagtattcaattgtcagaggtgaaattct 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1187 cgtaatgattaatagggacggtcgggggcatcagtattcaattgtcagaggtgaaattct 1128
Query: 900 tggatttattgaagactaactactgcgaaasattttgccaaggacgttttcattaatcaa 959
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1127 tggatttattgaagactaactactgcgaaacattttgccaaggacgttttcattaatcaa 1068
Query: 960 gaacgaa 966
|||||||
Sbjct: 1067 gaacgaa 1061
>3x_Contig1530
Length = 6216
Score = 846 bits (425), Expect = 0.0
Identities = 459/469 (97%), Gaps = 1/469 (0%)
Strand = Plus / Plus
Query: 364 tcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagcaggcgcg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 tcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagcaggcgcg 73
Query: 424 caaattacccaatcctaattcagggaggtagtgacaataaataacgatacagggcccatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 caaattacccaatcctaattcagggaggtagtgacaataaataacgatacagggcccatt 133
Query: 484 cgggtcttgtaattggaatgagtacaatgtaaataccttaacgaggaacaactggagggc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 cgggtcttgtaattggaatgagtacaatgtaaataccttaacgaggaacaactggagggc 193
Query: 544 aagtctggtgccagcagccgcggtaattccagctccagtagcgtatattaaagttgttgc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 aagtctggtgccagcagccgcggtaattccagctccagtagcgtatattaaagttgttgc 253
Query: 604 agttaaaaagctcgtagttgaactttgggtctggttgtccggtccgactttatgtcgcgc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 agttaaaaagctcgtagttgaactttgggtctggttgtccggtccgactttatgtcgcgc 313
Query: 664 actggttttcaaccggatctttccttctggctaacctgtactccttgtgggtgcaggcga 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 actggttttcaaccggatctttccttctggctaacctgtactccttgtgggtgcaggcga 373
Query: 724 accaggacttttactttgaaaaaattagagtgttcaaagcaggcgaaa-ctcgaatatat 782
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 374 accaggacttttactttgaaaaaattagagtgttcaaagcaggcgaaagctcgaatatat 433
Query: 783 tagcatggaataatggaataggacgtttggttctattttgttggtttct 831
|||||||| | ||| | || ||||||||||| ||||||||||||||
Sbjct: 434 tagcatggcctcctggcctcggccgtttggttctcttttgttggtttct 482
>3x_Contig18
Length = 1116
Score = 434 bits (218), Expect = e-121
Identities = 238/248 (95%)
Strand = Plus / Plus
Query: 66 tatacagtgaactgcgaatkgctcattatatttkttatcgtttatttgatagttccttta 125
||||||||||| ||||||| |||||||| || ||||||||||||||||||||||||||
Sbjct: 39 tatacagtgaaatgcgaatggctcattaaatcagttatcgtttatttgatagttccttta 98
Query: 126 ctacatggatatctgtggtaattctagagctaatacatgcttaaaatctcgaccctttgg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 ctacatggatatctgtggtaattctagagctaatacatgcttaaaatctcgaccctttgg 158
Query: 186 awgtkatgtatttattagataaaamatcaatgtcttcggactccttgatgattcataata 245
| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 159 aagagatgtatttattagataaaaaatcaatgtcttcggactccttgatgattcataata 218
Query: 246 acttttcgaatcgcatggccttgtgctggcgatggttcattcaaatttctgccctatcaa 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 acttttcgaatcgcatggccttgtgctggcgatggttcattcaaatttctgccctatcaa 278
Query: 306 ctttcgat 313
||||||||
Sbjct: 279 ctttcgat 286
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5447
Number of Sequences: 1807
Number of extensions: 5447
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 3
length of query: 966
length of database: 10,358,551
effective HSP length: 16
effective length of query: 950
effective length of database: 10,329,639
effective search space: 9813157050
effective search space used: 9813157050
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)